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入学希望の方一般・社会人の方研究者の方同窓生の方在学生の方教職員の方 日本語 (Japanese) Graduate School of Life Sciences, Tohoku University Access sitemap Link Tohoku University HOMEAbout UsAbout UsMessage from the DeanOrganizationMovieResearchLaboratories Department of Integrative Life Sciences Department of Ecological Developmental Adaptability Life Sciences Department of Molecular and Chemical Life SciencesResearchAwardEducationDegree ProgramsCourseSyllabusScheduleStudent LifeAdmissionAdmission InformationApplicationExamination Schedule and Application GuidelinesInformation Session(2024)Admission and Tuition FeesAdmission PolicyVoices from Graduates and Current StudentsAdmissions Q&AInquiries about Entrance ExaminationsFinancial SupportFor StudentsGraduate School&#039;s Message Board for Students Information about Completion and Advancement to the Doctoral Course ProceduresCertificatesAbout Issuance of Various CertificatesNotice Regarding the Suspension of Operation of the Automatic Certificate Issuing MachinesLeave of absence/withdrawal from universityCampus Life, Various consultation servicesContactAccessLinkSitemapInformationAdmissionResearchAwardSeminarJobNewsAnnouncementOther MENU HOMEAbout UsAbout UsMessage from the DeanOrganizationMovieResearchLaboratoriesResearchAwardEducationDegree ProgramsCourseSyllabusScheduleStudent LifeAdmissionAdmission InformationApplicationExamination Schedule and Application GuidelinesInformation Session(2024)Admission and Tuition FeesAdmission PolicyVoices from Graduates and Current StudentsAdmissions Q&AInquiries about Entrance ExaminationsFinancial SupportFor StudentsGraduate School&#039;s Message Board for Students Information about Completion and Advancement to the Doctoral Course ProceduresCertificatesLeave of absence/withdrawal from universityCampus Life, Various consultation servicesContactAccessLinkSitemapInformationAdmissionResearchAwardSeminarJobNewsAnnouncementOther 日本語 (Japanese) CLOSE Graduate School of Life Sciences, Tohoku University. Field Molecular and Chemical Life Science :Molecular and Network Genomics Research HOME Research Researcher JAPANESE Associate Professor OTSUBO Yoshiyuki Campus Katahira campus Laboratory Microbial Genetics and Evolution Tel +81-22-217-5696 E-mail yohtsubo @ige.tohoku.ac.jp Website http://www.ige.tohoku.ac.jp/joho/gmProject/gmhomeJP.html I love outdoor activities: hiking, skiing, fishing, and collecting wild plants for eating TEMPRA. Career I received a Ph.D. degree from Graduate School of Agricultural and Life Sciences, The University of Tokyo. After working as a special postdoctoral researcher at RIKEN for two years, I was appointed an assistant professor at Tohoku University. Selected Publications Ohtsubo, Y., F. Maruyama, H. Mitsui, Y. Nagata, and M. Tsuda: Complete genome sequence of Acidovorax sp. KKS102, a polychlorinated biphenyl-degrading strain: J. Bacteriol. 194: 6970-6971 (2012) Ohtsubo, Y., Y. Ishibashi, H. Naganawa, S. Hirokawa, S. Atobe, Y. Nagata, and M. Tsuda: Conjugal transfer of polychlorinated biphenyl/biphenyl degradation genes in Acidovorax sp. KKS102 located on integrative and conjugative element. J, Bacteriol. 184: 4237-4248 (2012) Ohtsubo, Y., E. Nishiyama, Y. Ishibashi, Y. Nagata, and M. Tsuda: Strategies to reveal genomic function in natural soil systems. In: Nojiri, H., M. Tsuda, M. Fukuda, and Y. Kamagata (eds), Biodegradative Bacteria: How Bacteria Degrade, Survive, Adapt, and Evolve. Springer, Tokyo. pp. 279-291 (2014) Activities in Academic Societies Society of Genome Microbiology, Japan; Japan Society for Bioscience, Biotechnology and Agrochemistry Recent Activities The genes for PCB degradation are located on a mobile genetic element, and its intercellular transposition was demonstrated first among related elements. I have also been conducting research that aims to understand the catabolite control mechanisms of a soil bacterium that degrades PCBs, which are man-made persistent substances. While conducting such so-called “wet research,” I have been creating and publishing computer software that allows efficient analysis of genomic data. A software program designated “GenomeMatcher” enables comparative genomics as well as information processing for a wide variety of purposes. “AceFileViewer” and “GenoFinisher” support finishing of microbial genomic sequencing, while “ShortReadManager” is useful for processing a huge amount of data generated by next-generation sequencers. ResearchLaboratories Department of Integrative Life Sciences Department of Ecological Developmental Adaptability Life Sciences Department of Molecular and Chemical Life SciencesResearchAward GO TOP Graduate School of Life SciencesTohoku University 2-1-1 Katahira, Aoba-Ku, Sendai 980-8577 Academic Affairs Section Tel : +81-22-217-5706 / Fax: +81-22-217-5704   General Affairs Section Tel : +81-22-217-5702 / Fax: +81-22-217-5704   Contact ・Privacy Policy HOMEAbout UsAbout UsMessage from the DeanOrganizationMovieResearchLaboratories Department of Integrative Life Sciences Department of Ecological Developmental Adaptability Life Sciences Department of Molecular and Chemical Life SciencesResearchAwardEducationDegree ProgramsCourseSyllabusScheduleStudent LifeAdmissionAdmission InformationApplicationExamination Schedule and Application GuidelinesInformation Session(2024)Admission and Tuition FeesAdmission PolicyVoices from Graduates and Current StudentsAdmissions Q&AInquiries about Entrance ExaminationsFinancial SupportFor StudentsGraduate School&#039;s Message Board for Students Information about Completion and Advancement to the Doctoral Course ProceduresCertificatesAbout Issuance of Various CertificatesNotice Regarding the Suspension of Operation of the Automatic Certificate Issuing MachinesLeave of absence/withdrawal from universityCampus Life, Various consultation servicesContactAccessLinkSitemapInformationAdmissionResearchAwardSeminarJobNewsAnnouncementOther © 2004-2023 Graduate School of Life Sciences, Tohoku University no cache

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